miRBase entry: rco-MIR395e

Stem-loop rco-MIR395e


Accession
MI0013417
Description
Ricinus communis rco-MIR395e precursor miRNA
Gene family
MIPF0000016; MIR395

Literature search
2 open access papers mention rco-MIR395e
(7 sentences)

Sequence

cuagaguucccuugaacacuucacugggacgaaaauccauucuuccaaCUGAAGUGUUUGGGGGAACUCuuggu
(.(((((((((((((((((((((.(((((.(((......))))))))..))))))))))))))))))))).)..

Structure
-- u                     -c     c   aa 
  c agaguucccuugaacacuuca  uggga gaa  u
  | |||||||||||||||||||||  ||||| |||   
  g uCUCAAGGGGGUUUGUGAAGU  accuu cuu  c
ug u                     Ca     -   ac 


Annotation confidence Not enough data
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Genome context
EQ973974.1: 61579-61652 [-]

Database links

Mature rco-miR395e

Accession MIMAT0014191
Description Ricinus communis rco-miR395e mature miRNA
Sequence 49 - CUGAAGUGUUUGGGGGAACUC - 69
Evidence experimental
RT-PCR [1]

References

  1. PubMed ID: 19942686
    Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
    "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
    "Nucleic Acids Res (2010) 38:981-995