Stem-loop rco-MIR397

Accession

MI0013419

Description

Ricinus communis rco-MIR397 precursor miRNA

Sequence

aaacaUCAUUGAGUGCAGCGUUGAUGaauuccccuacaugacauauuucuguugguuaauucauuaccaauaucccuucuuuaaaaaaagaaguaaaccuuuuugggaauagaugguuuuggaugauuucaccagcgcugcauucaaucauguuuuu
((((((.((((((((((((((((.((((.((.((.(((.((......))))).))...(((((..((((.((((((((((((....))))))............))).)))..))))..))))))).)))).)))))))))))))))).))))))..

Structure

--      C                A    u  cccuacaugacauauuucuguugguua     uu    -a   -   ------------      a 
  aaacaU AUUGAGUGCAGCGUUG UGaa uc                           auuca  acca  uau ccc            uucuuu a
  |||||| |||||||||||||||| |||| ||                           |||||  ||||  ||| |||            ||||||  
  uuugua uaacuuacgucgcgac acuu ag                           uaggu  uggu  aua ggg            aagaaa a
uu      c                c    u  ---------------------------     uu    ag   a   uuuuuccaaaug      a 

Annotation confidence Not enough data

Genome context

EQ973944.1: 359596-359752 [-]

Mature rco-miR397

• Accession: MIMAT0014193
• Description: Ricinus communis rco-miR397 mature miRNA
• Sequence: 6 - UCAUUGAGUGCAGCGUUGAUG - 26
• Evidence: experimental ; RT-PCR [1]

References

1. PubMed ID: 19942686
   Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
   "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
   "Nucleic Acids Res (2010) 38:981-995