Stem-loop rco-MIR398b

Accession

MI0013421

Description

Ricinus communis rco-MIR398b precursor miRNA

Literature search

2 open access papers mention rco-MIR398b
(6 sentences)

Sequence

cuacaggagcgaccugagaaucacauguggacauucuuagcuauauauacccuuaucaucuucucuuauuuuggguuuauuguacuuugguguucuuucaUGUGUUCUCAGGUCGCCCCUGccggg
...((((.((((((((((((.((((((.((((((.(..((.((((((.((((....................)))).)).))))))..)))))))...)))))))))))))))))).)))).....

Structure

--cua    a            u      --u      u uu  c    -  u    uuaucaucu 
     cagg gcgaccugagaa cacaug   ggacau c  ag uaua ua accc         u
     |||| |||||||||||| ||||||   |||||| |  || |||| || ||||          
     GUCC CGCUGGACUCUU GUGUac   cuugug g  uc augu au uggg         c
gggcc    C            -      uuu      - uu  -    u  u    uuuuauucu 

Annotation confidence Not enough data

Genome context

EQ974235.1: 166476-166601 [-]

Mature rco-miR398b

• Accession: MIMAT0014195
• Description: Ricinus communis rco-miR398b mature miRNA
• Sequence: 101 - UGUGUUCUCAGGUCGCCCCUG - 121
• Evidence: experimental ; RT-PCR [1]

References

1. PubMed ID: 19942686
   Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
   "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
   "Nucleic Acids Res (2010) 38:981-995