Stem-loop rco-MIR399a

Accession

MI0013422

Description

Ricinus communis rco-MIR399a precursor miRNA

Literature search

2 open access papers mention rco-MIR399a
(7 sentences)

Sequence

uuguagggcaccucuugcuuggcagguaaaggggacacuagcuagcauaacaucccaauaacuugcuUGCCAAAGGAGAGUUGCCCUGugacu
...(((((((.(((((..(((((((((((..((((...((.......))...))))......)))))))))))..))))).))))))).....

Structure

--uug       c     gc           ----ag    cac  gc 
     uagggca cucuu  uuggcagguaa      ggga   ua  u
     ||||||| |||||  |||||||||||      ||||   ||  a
     GUCCCGU GAGAG  AACCGUucguu      cccu   au  g
ucagu       U     GA           caauaa    aca  ac 

Annotation confidence Not enough data

Genome context

EQ973773.1: 464925-465017 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from rco-MIR399a

Mature rco-miR399a

• Accession: MIMAT0014196
• Description: Ricinus communis rco-miR399a mature miRNA
• Sequence: 68 - UGCCAAAGGAGAGUUGCCCUG - 88
• Evidence: experimental ; RT-PCR [1]

References

1. PubMed ID: 19942686
   Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
   "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
   "Nucleic Acids Res (2010) 38:981-995