Stem-loop rco-MIR399c

Accession

MI0013424

Description

Ricinus communis rco-MIR399c precursor miRNA

Literature search

2 open access papers mention rco-MIR399c
(7 sentences)

Sequence

uuacagggcaaaaccuucauuggcaugcugccagacuaagaugugggacgcauuccuaucgugugcaucaUGCCAAAGGAGAUUUGCCCGGcgaua
.....(((((((..((((.((((((((.(((((((....((((((...))))))....)).)).))).)))))))).)))).))))))).......

Structure

--uuaca       ac    a        c   -  -  cuaa      g 
       gggcaaa  cuuc uuggcaug ugc ca ga    gaugug  
       |||||||  |||| |||||||| ||| || ||    |||||| g
       CCCGUUU  GAGG AACCGUac acg gu cu    uuacgc  
auagcGG       -A    A        u   u  g  aucc      a 

Annotation confidence Not enough data

Genome context

EQ973891.1: 138457-138552 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from rco-MIR399c

Mature rco-miR399c

• Accession: MIMAT0014198
• Description: Ricinus communis rco-miR399c mature miRNA
• Sequence: 71 - UGCCAAAGGAGAUUUGCCCGG - 91
• Evidence: experimental ; RT-PCR [1]

References

1. PubMed ID: 19942686
   Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
   "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
   "Nucleic Acids Res (2010) 38:981-995