miRBase entry: bmo-mir-iab-8

Stem-loop bmo-mir-iab-8


Accession
MI0013534
Description
Bombyx mori bmo-mir-iab-8 precursor miRNA


Sequence

608 reads, 1 reads per million, 3 experiments
gugucaucuucugUUACGUAUACUGAAGGUAUACCGgacaagaaucgcgcacucaggauacauucaguauacguacagaaggcgacgc
(((((.((((((((.((((((((((((.((((.((.((..............)).)))))).)))))))))))))))))))).)))))

Structure
     a        U            G    A  G  caagaa 
guguc ucuucugU ACGUAUACUGAA GUAU CC ga      u
||||| |||||||| |||||||||||| |||| || ||       
cgcag ggaagaca ugcauaugacuu caua gg cu      c
     c        -            a    -  a  cacgcg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
NW_004582018.1: 3486590-3486677 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bmo-mir-iab-8
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bmo-miR-iab-8

Accession MIMAT0014327
Description Bombyx mori bmo-miR-iab-8 mature miRNA
Sequence 14 - UUACGUAUACUGAAGGUAUACCG - 36
Evidence experimental
RTPCR [1]

References

  1. PubMed ID: 19823945
    Computational identification and characteristics of novel microRNAs from the silkworm (Bombyx mori L.)
    "Huang Y, Zou Q, Tang SM, Wang LG, Shen XJ"
    "Mol Biol Rep (2010) 37:3171-3176