Stem-loop tgu-mir-2959

Accession

MI0013645

Description

Taeniopygia guttata tgu-mir-2959 precursor miRNA

Sequence

uggggggugaaggagUUCCUGGAGUGAGCUGAAGGUUcuggagcucaguggauaaucacagcucacauccaggagcucucaccugcccca
((((((((((..(((((((((((((((((((..(((((((.....))).....)))).)))))))).))))))))))))))))..)))))

Structure

     --     ag           -        AA    -----   g 
ugggg  gguga  gagUUCCUGGA GUGAGCUG  GGUU     cug a
|||||  |||||  ||||||||||| ||||||||  ||||     ||| g
acccc  ccacu  cucgaggaccu cacucgac  cuaa     gac c
     gu     --           a        -a    uaggu   u 

Annotation confidence Not enough data

Genome context

chr21_random: 691001-691090 [+]

Mature tgu-miR-2959

• Accession: MIMAT0014458
• Description: Taeniopygia guttata tgu-miR-2959 mature miRNA
• Sequence: 16 - UUCCUGGAGUGAGCUGAAGGUU - 37
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20360741
   The genome of a songbird
   "Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li"
   "Nature (2010) 464:757-762