Stem-loop tgu-mir-2961

Accession

MI0013648

Description

Taeniopygia guttata tgu-mir-2961 precursor miRNA

Sequence

cccgggccccgcccgccgccuccccgucgcccuuccccggccgcucgcggaccgggAGGAAGGUAGGGCGGGCGUCGCUcccccacgggcucggcgcucgcgcgccuuccccccgggcgcgugccccuaaggggaaggggcuccguggcggugcgaggcggcggcggucccggg
((((((..(((((.((((((((((((((((((((((((((..((.((((..(((((.(((((((.(.((((((((((..(((....)))..)))))))))).)))))))).))))).)))).)).))...)))))))))......)))))).).))))))))))))).))))))

Structure

      cc     c        - -      ------         ---  cc  u    ga     A       A G          CU   c 
cccggg  ccgcc gccgccuc c ccgucg      cccuucccc   gg  gc cgcg  ccggg GGAAGGU G GCGGGCGUCG  ccc c
||||||  ||||| |||||||| | ||||||      |||||||||   ||  || ||||  ||||| ||||||| | ||||||||||  |||  
gggccc  ggcgg cggcggag g ggcggu      gggaagggg   cc  cg gcgc  ggccc ccuuccg c cgcucgcggc  ggg a
      -u     -        c u      gccucg         aau  -c  u    -g     c       - g          uc   c 

Annotation confidence Not enough data

Genome context

chrUn: 173940744-173940917 [-]

Mature tgu-miR-2961

• Accession: MIMAT0014461
• Description: Taeniopygia guttata tgu-miR-2961 mature miRNA
• Sequence: 57 - AGGAAGGUAGGGCGGGCGUCGCU - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20360741
   The genome of a songbird
   "Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li"
   "Nature (2010) 464:757-762