Stem-loop tgu-mir-2969

Accession

MI0013664

Description

Taeniopygia guttata tgu-mir-2969 precursor miRNA

Sequence

guuucugugggaguuucuggguGCAGCUGUAGGAGCCAGUGAUGGaagaacgguuuuaugggccacgcaggcuccucggcacauccaggcucuuacccaagc
((((..((((((((..(((((((..((((.(((((((.(((.(((.....((......))..)))))).))))))))))).)))))))))))))))..))))

Structure

    cu        uu       CA    U       A   A   aagaa  gu 
guuu  gugggagu  cuggguG  GCUG AGGAGCC GUG UGG     cg  u
||||  ||||||||  |||||||  |||| ||||||| ||| |||     ||   
cgaa  cauucucg  gaccuac  cggc uccucgg cgc acc     gu  u
    cc        --       -a    -       a   -   ---gg  au 

Annotation confidence Not enough data

Genome context

chr12: 3102837-3102938 [-]

Mature tgu-miR-2969

• Accession: MIMAT0014478
• Description: Taeniopygia guttata tgu-miR-2969 mature miRNA
• Sequence: 23 - GCAGCUGUAGGAGCCAGUGAUGG - 45
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 20360741
   The genome of a songbird
   "Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li"
   "Nature (2010) 464:757-762


2. PubMed ID: 23268654
   Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression
   Luo GZ, Hafner M, Shi Z, Brown M, Feng GH, Tuschl T, Wang XJ, Li X
   BMC Genomics (2012) 13:727