Stem-loop tgu-mir-2974

Accession

MI0013670

Description

Taeniopygia guttata tgu-mir-2974 precursor miRNA

Sequence

ggggcgggggcgGCGGGAUGGGCUGGGCCGGGcugggcugggcacggcucggcucggcacggcgggguucgguugggcacggcucggcucggcucggcucggcucggcacggcuggcacgcagcucgcucc
((((((((.(((((.((.(.(((((((((((((((((((((((.((((.(((((((((.(((......)))))))))).)))).)))))))))))))))))))))))).).))).)).)))..))))))))

Structure

        -g   -  G  A G -                      a  -  u  -       a   cg 
ggggcggg  gcg GC GG U G GCUGGGCCGGGcugggcugggc cg gc cg gcucggc cgg  g
||||||||  ||| || || | | |||||||||||||||||||||| || || || ||||||| |||   
ccucgcuc  cgc cg uc g c cggcucggcucggcucggcucg gc cg gc cggguug gcu  g
        ga   a  g  - g a                      -  u  -  a       -   ug 

Annotation confidence Not enough data

Genome context

chr5: 60051711-60051841 [-]

Mature tgu-miR-2974

• Accession: MIMAT0014484
• Description: Taeniopygia guttata tgu-miR-2974 mature miRNA
• Sequence: 13 - GCGGGAUGGGCUGGGCCGGG - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20360741
   The genome of a songbird
   "Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li"
   "Nature (2010) 464:757-762