Stem-loop tgu-mir-2976-1

Accession

MI0013672

Description

Taeniopygia guttata tgu-mir-2976-1 precursor miRNA

Literature search

1 open access papers mention tgu-mir-2976-1
(1 sentences)

Sequence

cgugccgugccgugccgugccgugccgugccgugccgugccgugccgugccgcgggagccgcccagcgcgggggccgccggugcggcgggaGCGGAGCGGAGCGGAGCGGGGcgguggcgguggcggcaug
((((((((((((((((((.((((.((((.((((.((((.((.(((((((((((((...((((.....))))...))).)))))))))))).)))).)))).)))).)))).))))).))))).))))))))

Structure

        -     -     g    g    g    g    g  g          -   gag    c 
cgugccgu gccgu gccgu ccgu ccgu ccgu ccgu cc ugccgugccg cgg   ccgc c
|||||||| ||||| ||||| |||| |||| |||| |||| || |||||||||| |||   |||| a
guacggcg uggcg uggcG GGCG GGCG GGCG GGCG gg gcggcguggc gcc   ggcg g
        g     g     G    A    A    A    a  -          c   ggg    c 

Annotation confidence Not enough data

Genome context

chr28: 2245990-2246120 [-]

Mature tgu-miR-2976

• Accession: MIMAT0014486
• Description: Taeniopygia guttata tgu-miR-2976 mature miRNA
• Sequence: 92 - GCGGAGCGGAGCGGAGCGGGG - 112
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20360741
   The genome of a songbird
   "Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li"
   "Nature (2010) 464:757-762