Stem-loop tgu-mir-2976-2

Accession

MI0013674

Description

Taeniopygia guttata tgu-mir-2976-2 precursor miRNA

Literature search

1 open access papers mention tgu-mir-2976-2
(1 sentences)

Sequence

ccgcucacaugaccaccgugacucgcugcucacgugaccgagcgacgggccgggccgggccgcggcggagccggaGCGGAGCGGAGCGGAGCGGGGccgggccgggacgg
((((((...((.((.((((..(.(.((((((.(((..(((.((..(..(((((((...))).)))))..))))).))))))))).).)..)))))).))....))).)))

Structure

   -   -aca  a  a    ga u g      a   ga   a  ga gg    -   c 
ccg cuc    ug cc ccgu  c c cugcuc cgu  ccg gc  c  gccg ggc  
||| |||    || || ||||  | | |||||| |||  ||| ||  |  |||| ||| g
ggc ggg    gc GG GGCG  G G GGCGAG GCG  ggc cg  g  cggc ccg  
   a   ccgg  c  -    AG C A      -   -a   -  ag --    g   g 

Annotation confidence Not enough data

Genome context

chr1: 113831865-113831974 [+]

Mature tgu-miR-2976

• Accession: MIMAT0014486
• Description: Taeniopygia guttata tgu-miR-2976 mature miRNA
• Sequence: 76 - GCGGAGCGGAGCGGAGCGGGG - 96
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20360741
   The genome of a songbird
   "Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li"
   "Nature (2010) 464:757-762