Stem-loop tgu-mir-2977

Accession

MI0013675

Description

Taeniopygia guttata tgu-mir-2977 precursor miRNA

Sequence

caagcuggcuacaauguguggguuugugggcucaaagcuugucgcuuucgaaggaGCUGAACCCUAGAGCCUGGCAcugugguauug
.......((((((.(((..((((((..(((.(((..((((.(((....)))..))))))).)))..)))))).))).))))))....

Structure

caagcug      a   gu      gu   c   aa    -g   c 
       gcuaca ugu  ggguuu  ggg uca  gcuu  ucg u
       |||||| |||  ||||||  ||| |||  ||||  |||  
       uggugu ACG  UCCGAG  CCC AGU  CGag  agc u
---guua      c   -G      AU   A   --    ga   u 

Annotation confidence Not enough data

Genome context

chr1: 48213234-48213320 [-]

Mature tgu-miR-2977

• Accession: MIMAT0014487
• Description: Taeniopygia guttata tgu-miR-2977 mature miRNA
• Sequence: 56 - GCUGAACCCUAGAGCCUGGCA - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20360741
   The genome of a songbird
   "Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li"
   "Nature (2010) 464:757-762