Stem-loop tgu-mir-2980-1

Accession

MI0013678

Description

Taeniopygia guttata tgu-mir-2980-1 precursor miRNA

Sequence

aguuuuucagcuugauccugcuccagugguaagguuucacuaaaaaccUUAGCACUGGAGCAGAGUCAagcugaaaaacu
((((((((((((((((.(((((((((((.((((((((......)))))))).))))))))))).))))))))))))))))

Structure

                c           g        ca 
aguuuuucagcuugau cugcuccagug uaagguuu  c
|||||||||||||||| ||||||||||| ||||||||   
ucaaaaagucgaACUG GACGAGGUCAC AUUccaaa  u
                A           G        aa 

Annotation confidence Low

Genome context

chr2: 61822032-61822111 [-]

Mature tgu-miR-2980

• Accession: MIMAT0014490
• Description: Taeniopygia guttata tgu-miR-2980 mature miRNA
• Sequence: 49 - UUAGCACUGGAGCAGAGUCA - 68
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 20360741
   The genome of a songbird
   "Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li"
   "Nature (2010) 464:757-762


2. PubMed ID: 23268654
   Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression
   Luo GZ, Hafner M, Shi Z, Brown M, Feng GH, Tuschl T, Wang XJ, Li X
   BMC Genomics (2012) 13:727