miRBase entry: tgu-mir-2991

Stem-loop tgu-mir-2991

Accession

MI0013762

Description

Taeniopygia guttata tgu-mir-2991 precursor miRNA

Sequence

uagaggugaccagcugcucugcaccaaggcccuugcagugAUGUAUCGUAGUCUGUUGCuguaaacauc
....((((((..(((((..((((.((..((....))..)).))))..)))))..)))))).........

Structure

-----uaga      ca     uc    c  ag  c 
         ggugac  gcugc  ugca ca  gc c
         ||||||  |||||  |||| ||  ||  
         uCGUUG  UGAUG  AUGU gu  cg u
cuacaaaug      UC     CU    A  ga  u

Annotation confidence Not enough data

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Genome context

chr2: 149540758-149540826 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from tgu-mir-2991

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature tgu-miR-2991

Accession	MIMAT0014547
Description	Taeniopygia guttata tgu-miR-2991 mature miRNA
Sequence	41 - AUGUAUCGUAGUCUGUUGC - 59
Evidence	experimental 454 [1]

References

PubMed ID: 20360741
The genome of a songbird
"Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li"
"Nature (2010) 464:757-762