Stem-loop tgu-mir-2991

Accession

MI0013762

Description

Taeniopygia guttata tgu-mir-2991 precursor miRNA

Sequence

uagaggugaccagcugcucugcaccaaggcccuugcagugAUGUAUCGUAGUCUGUUGCuguaaacauc
....((((((..(((((..((((.((..((....))..)).))))..)))))..)))))).........

Structure

-----uaga      ca     uc    c  ag  c 
         ggugac  gcugc  ugca ca  gc c
         ||||||  |||||  |||| ||  ||  
         uCGUUG  UGAUG  AUGU gu  cg u
cuacaaaug      UC     CU    A  ga  u 

Annotation confidence Low

Genome context

chr2: 149540758-149540826 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from tgu-mir-2991

Mature tgu-miR-2991

• Accession: MIMAT0014547
• Description: Taeniopygia guttata tgu-miR-2991 mature miRNA
• Sequence: 41 - AUGUAUCGUAGUCUGUUGC - 59
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20360741
   The genome of a songbird
   "Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li"
   "Nature (2010) 464:757-762