Stem-loop tgu-mir-204-2

Accession

MI0013792

Description

Taeniopygia guttata tgu-mir-204-2 precursor miRNA

Gene family

MIPF0000042; mir-204

Literature search

1 open access papers mention tgu-mir-204-2
(1 sentences)

Sequence

accugugggcUUCCCUUUGUCAUCCUAUGCCUggagaucacagugaggcagggacagcaaagggaugcucag
.....(((((.(((((((((..((((.(((((.............)))))))))..))))))))).))))).

Structure

accug     U         CA    A     ggaga 
     ugggc UCCCUUUGU  UCCU UGCCU     u
     ||||| |||||||||  |||| |||||     c
     acucg agggaaacg  aggg acgga     a
----g     u         ac    -     gugac 

Annotation confidence Not enough data

Genome context

chr10: 5338529-5338600 [+]

Mature tgu-miR-204

• Accession: MIMAT0014570
• Description: Taeniopygia guttata tgu-miR-204 mature miRNA
• Sequence: 11 - UUCCCUUUGUCAUCCUAUGCCU - 32
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 20360741
   The genome of a songbird
   "Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li"
   "Nature (2010) 464:757-762


2. PubMed ID: 23268654
   Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression
   Luo GZ, Hafner M, Shi Z, Brown M, Feng GH, Tuschl T, Wang XJ, Li X
   BMC Genomics (2012) 13:727