Stem-loop tgu-mir-375

Accession

MI0013798

Description

Taeniopygia guttata tgu-mir-375 precursor miRNA

Sequence

ccuggcgucgagccccacgugcaauaccugaccugaacguUUUGUUCGUUCGGCUCGCGUUAggcaggucca
(((((((.((((((..(((.((((.((...........)).)))).)))..)))))))))))))........

Structure

--------       u      cc   u    u  cuga 
        ccuggcg cgagcc  acg gcaa ac    c
        ||||||| ||||||  ||| |||| ||    c
        ggAUUGC GCUCGG  UGC UGUU ug    u
accuggac       -      CU   U    U  caag 

Annotation confidence Not enough data

Genome context

chr7: 10362273-10362344 [-]

Mature tgu-miR-375

• Accession: MIMAT0014572
• Description: Taeniopygia guttata tgu-miR-375 mature miRNA
• Sequence: 41 - UUUGUUCGUUCGGCUCGCGUUA - 62
• Evidence: experimental ; 454 [1], Illumina [1-2]

References

1. PubMed ID: 20360741
   The genome of a songbird
   "Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li"
   "Nature (2010) 464:757-762


2. PubMed ID: 23268654
   Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression
   Luo GZ, Hafner M, Shi Z, Brown M, Feng GH, Tuschl T, Wang XJ, Li X
   BMC Genomics (2012) 13:727