Stem-loop tgu-mir-223

Accession

MI0013827

Description

Taeniopygia guttata tgu-mir-223 precursor miRNA

Sequence

guguauuugacaagcugaguccgacacucagugugcagagUGUCAGUUUGUCAAAUACCCCaagugaggca
..((((((((((((((......(((((((........))))))))))))))))))))).............

Structure

-----------gu              gagucc       agu 
             guauuugacaagcu      gacacuc   g
             ||||||||||||||      |||||||    
             CAUAAACUGUUUGA      CUGUgag   u
acggagugaaCCC              ------       acg 

Annotation confidence Not enough data

Genome context

chr4A: 6644931-6645001 [-]

Mature tgu-miR-223

• Accession: MIMAT0014599
• Description: Taeniopygia guttata tgu-miR-223 mature miRNA
• Sequence: 41 - UGUCAGUUUGUCAAAUACCCC - 61
• Evidence: experimental ; 454 [1], Illumina [1-2]

References

1. PubMed ID: 20360741
   The genome of a songbird
   "Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li"
   "Nature (2010) 464:757-762


2. PubMed ID: 23268654
   Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression
   Luo GZ, Hafner M, Shi Z, Brown M, Feng GH, Tuschl T, Wang XJ, Li X
   BMC Genomics (2012) 13:727