Stem-loop bmo-mir-2999

Accession

MI0013855

Description

Bombyx mori bmo-mir-2999 precursor miRNA

Literature search

1 open access papers mention bmo-mir-2999
(1 sentences)

Sequence

208 reads, 47 reads per million, 3 experiments

cgcccgcgcggCUGCGACGGACUAGACGCGCAuuuuccucgggcugcuguugaaccuugcgcaguuucaguuauuuguuuaguuauuguuuuaguuauuacguuguggggg
(.((((((((((((.(((((((((((((((((..(((..(((....)))..)))...)))))..............))))))))..)))).)))).....)).)))))).)

Structure

 g      -  -----    C    --        --------------     -uu   cu   g 
c cccgcg cg     gCUG GACG  GACUAGAC              GCGCA   uuc  cgg c
| |||||| ||     |||| ||||  ||||||||              |||||   |||  |||  
g gggugu gc     ugau uugu  uugauuug              cgcgu   aag  guc u
 g      u  auuau    u    ua        uuuauugacuuuga     ucc   uu   g 

Annotation confidence Not enough data

Genome context

NW_004581688.1: 951610-951720 [+]

Mature bmo-miR-2999

• Accession: MIMAT0014660
• Description: Bombyx mori bmo-miR-2999 mature miRNA
• Sequence: 12 - CUGCGACGGACUAGACGCGCA - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20089182
   Deep sequencing of small RNA libraries reveals dynamic regulation of conserved and novel microRNAs and microRNA-stars during silkworm development
   Jagadeeswaran G, Zheng Y, Sumathipala N, Jiang H, Arrese EL, Soulages JL, Zhang W, Sunkar R
   BMC Genomics (2010) 11:52