Stem-loop bmo-mir-2733h

Accession

MI0013859

Description

Bombyx mori bmo-mir-2733h precursor miRNA

Literature search

1 open access papers mention bmo-mir-2733h
(4 sentences)

Sequence

9 reads, 1 reads per million, 2 experiments

ucucucuaaugcagucaucauacucugaguugauauguggaaaauucuaUCACUGGGUGUAUGAUGAUUGugguagagaga
((((((((.((((((((((((((.((.(((.((((.((.....))..))))))).)).)))))))))))))).))))))))

Structure

        a              u  g   u    -u  g 
ucucucua ugcagucaucauac cu agu gaua  gu g
|||||||| |||||||||||||| || ||| ||||  || a
agagagau guGUUAGUAGUAUG GG UCA CUau  ua a
        g              U  G   -    cu  a 

Annotation confidence Not enough data

Genome context

NW_004581684.1: 347062-347142 [-]

Clustered miRNAs

14 other miRNAs are < 10 kb from bmo-mir-2733h

Mature bmo-miR-2733h

• Accession: MIMAT0014663
• Description: Bombyx mori bmo-miR-2733h mature miRNA
• Sequence: 50 - UCACUGGGUGUAUGAUGAUUG - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20089182
   Deep sequencing of small RNA libraries reveals dynamic regulation of conserved and novel microRNAs and microRNA-stars during silkworm development
   Jagadeeswaran G, Zheng Y, Sumathipala N, Jiang H, Arrese EL, Soulages JL, Zhang W, Sunkar R
   BMC Genomics (2010) 11:52