Stem-loop hma-mir-3003a

Accession

MI0013863

Description

Hydra magnipapillata hma-mir-3003a precursor miRNA

Sequence

aagcuauuuauaucaUUACCAAAUUGCACACUUAACauaacuguUAAAUGUGCAAACUGGUAAUGAaauaaauacug
.((.(((((((.(((((((((..(((((((.((((((....)))))).)))))))..))))))))).))))))))).

Structure

a  c       a         AA       C      u 
 ag uauuuau ucaUUACCA  UUGCACA UUAACa a
 || ||||||| |||||||||  ||||||| ||||||  
 uc auaaaua AGUAAUGGU  AACGUGU AAUugu a
g  -       a         CA       A      c 

Annotation confidence Not enough data

Genome context

Unknown

Mature hma-miR-3003a-5p

• Accession: MIMAT0014667
• Description: Hydra magnipapillata hma-miR-3003a-5p mature miRNA
• Sequence: 16 - UUACCAAAUUGCACACUUAAC - 36
• Evidence: experimental ; 454 [1]

Mature hma-miR-3003a-3p

• Accession: MIMAT0014668
• Description: Hydra magnipapillata hma-miR-3003a-3p mature miRNA
• Sequence: 45 - UAAAUGUGCAAACUGGUAAUGA - 66
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20228792
   The dynamic genome of Hydra
   "Chapman JA, Kirkness EF, Simakov O, Hampson SE, Mitros T, Weinmaier T, Rattei T, Balasubramanian PG, Borman J, Busam D, Disbennett K, Pfannkoch C, Sumin N, Sutton GG, Viswanathan LD, Walenz B, Goodstein DM, Hellsten U, Kawashima T, Prochnik SE, Putnam NH,"
   "Nature (2010) 464:592-596