Stem-loop hsv1-mir-H11

Accession

MI0013885

Description

Herpes Simplex Virus 1 hsv1-mir-H11 precursor miRNA

Sequence

gggcguggccgcuauuauaaaaaaagugagaacgcgaagcguucgcacuuuguccuaauaauauauauauuaUUAGGACAAAGUGCGAACGCuucgcguucucacuuuuuuuauaauagcggccacgccc
(((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((....)))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))

Structure

                                                               u 
gggcguggccgcuauuauaaaaaaagugagaacgcgaagcguucgcacuuuguccuaauaaua a
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
cccgcaccggcgauaauauuuuuuucacucuugcgcuuCGCAAGCGUGAAACAGGAUUauuau u
                                                               a 

Annotation confidence Not enough data

Genome context

Unknown

Mature hsv1-miR-H11

• Accession: MIMAT0014688
• Description: Herpes Simplex Virus 1 hsv1-miR-H11 mature miRNA
• Sequence: 73 - UUAGGACAAAGUGCGAACGC - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20181707
   Numerous conserved and divergent microRNAs expressed by herpes simplex viruses 1 and 2
   "Jurak I, Kramer MF, Mellor JC, van Lint AL, Roth FP, Knipe DM, Coen DM"
   "J Virol (2010) 84:4659-4672