Stem-loop hsv2-mir-H21

Accession

MI0013903

Description

Herpes Simplex Virus 2 hsv2-mir-H21 precursor miRNA

Sequence

guuuguuucguccgaacccaugcgccuccaucgagAUAACGUCAUGCUGUCUACGGaaccagac
(((((((((((..((...((((((.(((....)))....)).))))...)).)))))).)))))

Structure

     -      cc  acc    -  ---c   c 
guuug uuucgu  ga   caug cg    cuc a
||||| ||||||  ||   |||| ||    |||  
cagac aaGGCA  CU   GUAC GC    gag u
     c      -U  GUC    U  AAUA   c 

Annotation confidence Not enough data

Genome context

Unknown

Mature hsv2-miR-H21

• Accession: MIMAT0014703
• Description: Herpes Simplex Virus 2 hsv2-miR-H21 mature miRNA
• Sequence: 36 - AUAACGUCAUGCUGUCUACGG - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20181707
   Numerous conserved and divergent microRNAs expressed by herpes simplex viruses 1 and 2
   "Jurak I, Kramer MF, Mellor JC, van Lint AL, Roth FP, Knipe DM, Coen DM"
   "J Virol (2010) 84:4659-4672