Stem-loop hsv2-mir-H23

Accession

MI0013905

Description

Herpes Simplex Virus 2 hsv2-mir-H23 precursor miRNA

Sequence

cguccgacggagAGGCCGUGGAGCUUGCCAGCgagacgcucaugaaacgcgaguugACGAGCUUCGCGGUACUACUCccccagggcg
(((((...(((((((((((((((((((.((((..(.((.........)))..)))).))))))))))))).)).))))....)))))

Structure

     -gac    -  -             C    ga a  cuc 
cgucc    ggag AG GCCGUGGAGCUUG CAGC  g cg   a
|||||    |||| || ||||||||||||| ||||  | ||   u
gcggg    cCUC UC UGGCGCUUCGAGC guug  c gc   g
     accc    A  A             A    ag -  aaa 

Annotation confidence Not enough data

Genome context

Unknown

Mature hsv2-miR-H23-5p

• Accession: MIMAT0014705
• Description: Herpes Simplex Virus 2 hsv2-miR-H23-5p mature miRNA
• Sequence: 13 - AGGCCGUGGAGCUUGCCAGC - 32
• Evidence: experimental ; Illumina [1]

Mature hsv2-miR-H23-3p

• Accession: MIMAT0014706
• Description: Herpes Simplex Virus 2 hsv2-miR-H23-3p mature miRNA
• Sequence: 57 - ACGAGCUUCGCGGUACUACUC - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20181707
   Numerous conserved and divergent microRNAs expressed by herpes simplex viruses 1 and 2
   "Jurak I, Kramer MF, Mellor JC, van Lint AL, Roth FP, Knipe DM, Coen DM"
   "J Virol (2010) 84:4659-4672