Stem-loop api-mir-184b

Accession

MI0013914

Description

Acyrthosiphon pisum api-mir-184b precursor miRNA

Literature search

1 open access papers mention api-mir-184b
(1 sentences)

Sequence

229843 reads, 48939.0 reads per million, 6 experiments

CUUUAUCAUUCUCUGGUCUUGUgugaauuuuauacuacUGGACGGAGAACUGAUAAAGGA
(((((((((((((((..(..((((((...))))))....)..))))))).))))))))..

Structure

--        -       GU --UU      a 
  CUUUAUCA UUCUCUG  C    GUguga  
  |||||||| |||||||  |    |||||| u
  GAAAUAGU AAGAGGC  G    cauauu  
AG        C       AG Ucau      u 

Annotation confidence High

Genome context

GL350175.1: 151852-151911 [+]

Mature api-miR-184b-5p

• Accession: MIMAT0057272
• Description: Acyrthosiphon pisum api-miR-184b-5p mature miRNA
• Sequence: 1 - CUUUAUCAUUCUCUGGUCUUGU - 22
• Evidence: experimental ; Illumina [1]

Mature api-miR-184b-3p

• Accession: MIMAT0014715
• Description: Acyrthosiphon pisum api-miR-184b-3p mature miRNA
• Sequence: 39 - UGGACGGAGAACUGAUAAAGGA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20444247
   Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
   Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
   BMC Genomics (2010) 11:281