Stem-loop api-mir-307

Accession

MI0013930

Description

Acyrthosiphon pisum api-mir-307 precursor miRNA

Literature search

1 open access papers mention api-mir-307
(2 sentences)

Sequence

acucacucaauuuggaugugauguucaaauuggcgccaCCACAACCUCCUUGAGUGAGCGA
.(((((((((...((.((((.((.(((...)))...)).)))).))...)))))))))...

Structure

--a         uuu  a    a  --u   a 
   cucacucaa   gg ugug ug   uca  
   |||||||||   || |||| ||   ||| a
   GAGUGAGUU   CC ACAC ac   ggu  
AGC         CCU  A    C  cgc   u 

Annotation confidence Not enough data

Genome context

GL350510.1: 73409-73469 [-]

Mature api-miR-307

• Accession: MIMAT0014729
• Description: Acyrthosiphon pisum api-miR-307 mature miRNA
• Sequence: 39 - CCACAACCUCCUUGAGUGAGCGA - 61

References

1. PubMed ID: 20444247
   Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
   Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
   BMC Genomics (2010) 11:281