Stem-loop api-mir-981

Accession

MI0013938

Description

Acyrthosiphon pisum api-mir-981 precursor miRNA

Literature search

1 open access papers mention api-mir-981
(1 sentences)

Sequence

4353 reads, 135.0 reads per million, 5 experiments

uggguuucuugaugacugggaccuugacauuauauuaauauggUUCGUUGUCGAUGAAACCUUGA
.(((((((((((((((..(((((..................))))))))))))).)))))))...

Structure

--u       -        ug     uugacauu 
   ggguuuc uugaugac  ggacc        a
   ||||||| ||||||||  |||||         
   UCCAAAG AGCUGUUG  CUUgg        u
AGU       U        --     uauaauua 

Annotation confidence Not enough data

Genome context

GL349816.1: 103288-103352 [+]

Mature api-miR-981-3p

• Accession: MIMAT0014736
• Description: Acyrthosiphon pisum api-miR-981-3p mature miRNA
• Sequence: 44 - UUCGUUGUCGAUGAAACCUUGA - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20444247
   Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
   Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
   BMC Genomics (2010) 11:281