Stem-loop api-mir-927

Accession

MI0013942

Description

Acyrthosiphon pisum api-mir-927 precursor miRNA

Literature search

1 open access papers mention api-mir-927
(6 sentences)

Sequence

11984 reads, 362.0 reads per million, 6 experiments

UUUAGAAUUCCUACGCUUUACCguacaauuuuaucggCAAAGCGUUUGAAUUGUAAAAC
((((.(((((..(((((((.(((...........))).)))))))..))))).))))..

Structure

--    G     CU       A   uaca 
  UUUA AAUUC  ACGCUUU CCg    a
  |||| |||||  ||||||| |||    u
  AAAU UUAAG  UGCGAAA ggc    u
CA    G     UU       C   uauu 

Annotation confidence High

Genome context

GL349685.1: 676583-676641 [-]

Mature api-miR-927-5p

• Accession: MIMAT0014740
• Description: Acyrthosiphon pisum api-miR-927-5p mature miRNA
• Sequence: 1 - UUUAGAAUUCCUACGCUUUACC - 22
• Evidence: experimental ; Illumina [1]

Mature api-miR-927-3p

• Accession: MIMAT0057290
• Description: Acyrthosiphon pisum api-miR-927-3p mature miRNA
• Sequence: 38 - CAAAGCGUUUGAAUUGUAAAAC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20444247
   Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
   Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
   BMC Genomics (2010) 11:281