miRBase entry: api-mir-929

Stem-loop api-mir-929


Accession
MI0013943
Description
Acyrthosiphon pisum api-mir-929 precursor miRNA


Sequence

AAAUUGACUCUAGUAGGGAGuccuuauauuuaaugugacucccuaauggggucagauuga
....((((((((.(((((((((((((....))).).))))))))).))))))))......

Structure
--AAAU        G         - -   u 
      UGACUCUA UAGGGAGuc c uua a
      |||||||| ||||||||| | |||  
      acuggggu aucccucag g aau u
aguuag        a         u u   u 


Annotation confidence Not enough data
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Genome context
GL349683.1: 424027-424086 [-]

Database links

Mature api-miR-929

Accession MIMAT0014741
Description Acyrthosiphon pisum api-miR-929 mature miRNA
Sequence 1 - AAAUUGACUCUAGUAGGGAG - 20
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20444247
    Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
    Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
    BMC Genomics (2010) 11:281