Stem-loop api-mir-971

Accession

MI0013949

Description

Acyrthosiphon pisum api-mir-971 precursor miRNA

Literature search

2 open access papers mention api-mir-971
(3 sentences)

Sequence

cacuuuaaguuugagcaccaagccucaggcuuauuguUUGGUGUUCAACCUUACAGUGAG
((((.((((.(((((((((((((............))))))))))))).)))).))))..

Structure

--    u    u             cucag 
  cacu uaag uugagcaccaagc     g
  |||| |||| |||||||||||||      
  GUGA AUUC AACUUGUGGUUug     c
GA    C    C             uuauu 

Annotation confidence Not enough data

Genome context

GL350500.1: 197684-197743 [+]

Mature api-miR-971

• Accession: MIMAT0014745
• Description: Acyrthosiphon pisum api-miR-971 mature miRNA
• Sequence: 38 - UUGGUGUUCAACCUUACAGUGAG - 60

References

1. PubMed ID: 20444247
   Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
   Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
   BMC Genomics (2010) 11:281