Stem-loop api-mir-9a

Accession

MI0013954

Description

Acyrthosiphon pisum api-mir-9a precursor miRNA

Literature search

2 open access papers mention api-mir-9a
(8 sentences)

Sequence

UCUUUGGUUAUCUAGCUGUAUGAguguuacguaugaagcuccucauaggucuaggugaccgaaguua
.((((((((((((((.(.((((((.(((........)))..)))))).).))))))))))))))...

Structure

--U              C G      -u   acg 
   CUUUGGUUAUCUAG U UAUGAg  guu   u
   |||||||||||||| | ||||||  |||    
   gaagccaguggauc g auacuc  cga   a
auu              u g      cu   agu 

Annotation confidence Not enough data

Genome context

GL349752.1: 521148-521214 [-]

Mature api-miR-9a

• Accession: MIMAT0014748
• Description: Acyrthosiphon pisum api-miR-9a mature miRNA
• Sequence: 1 - UCUUUGGUUAUCUAGCUGUAUGA - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20444247
   Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
   Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
   BMC Genomics (2010) 11:281