Stem-loop api-mir-3015a-1

Accession

MI0013956

Description

Acyrthosiphon pisum api-mir-3015a-1 precursor miRNA

Sequence

65 reads, 5.0 reads per million, 4 experiments

gguucuuacgaccuccgguuaaaguuaaccgacacuUUACUGGACAUUGUAAGAACGG
.((((((((((..((((((.(((((........)))))))))))..))))))))))..

Structure

-g          cc      u     uaa 
  guucuuacga  uccggu aaagu   c
  ||||||||||  |||||| |||||    
  CAAGAAUGUU  AGGUCA UUuca   c
GG          AC      -     cag 

Annotation confidence Not enough data

Genome context

GL349758.1: 530108-530165 [+]

Mature api-miR-3015a-3p

• Accession: MIMAT0014750
• Description: Acyrthosiphon pisum api-miR-3015a-3p mature miRNA
• Sequence: 37 - UUACUGGACAUUGUAAGAACGG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20444247
   Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
   Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
   BMC Genomics (2010) 11:281