Stem-loop api-mir-3017a

Accession

MI0013959

Description

Acyrthosiphon pisum api-mir-3017a precursor miRNA

Sequence

ccguguucuaugauagacucggcuggcgccugcCGGUCUGUCGCAGAACACGGCA
(((((((((.((((((((.((((........)))))))))))).)))))))))..

Structure

--         a        u    ugg 
  ccguguucu ugauagac cggc   c
  ||||||||| |||||||| ||||    
  GGCACAAGA GCUGUCUG GCcg   g
AC         C        -    ucc 

Annotation confidence Not enough data

Genome context

GL351009.1: 15608-15662 [+]

Mature api-miR-3017a

• Accession: MIMAT0014752
• Description: Acyrthosiphon pisum api-miR-3017a mature miRNA
• Sequence: 34 - CGGUCUGUCGCAGAACACGGCA - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20444247
   Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
   Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
   BMC Genomics (2010) 11:281