Stem-loop api-mir-3023

Accession

MI0013966

Description

Acyrthosiphon pisum api-mir-3023 precursor miRNA

Sequence

ggcauuucuguuuucaagccuuauuaaaauuuuaaaauAAGCUUGAUUUCAGAAAUGUCGA
((((((((((...((((((.(((((..........)))))))))))...))))))))))..

Structure

--          uuu      c     aaaa 
  ggcauuucug   ucaagc uuauu    u
  ||||||||||   |||||| |||||     
  CUGUAAAGAC   AGUUCG AAuaa    u
AG          UUU      -     aauu 

Annotation confidence Not enough data

Genome context

GL350151.1: 170256-170316 [-]

Mature api-miR-3023

• Accession: MIMAT0014759
• Description: Acyrthosiphon pisum api-miR-3023 mature miRNA
• Sequence: 39 - AAGCUUGAUUUCAGAAAUGUCGA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20444247
   Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
   Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
   BMC Genomics (2010) 11:281