Stem-loop api-mir-3029

Accession

MI0013972

Description

Acyrthosiphon pisum api-mir-3029 precursor miRNA

Sequence

uugguaacaucaaccucuuuagcgaauauuugacgcacuAAAGACGUAAAUGUUACCUGCG
..((((((((..((.(((((((.(...........).))))))).))..))))))))....

Structure

--uu        ca  c       c aaua 
    gguaacau  ac ucuuuag g    u
    ||||||||  || ||||||| |    u
    CCAUUGUA  UG AGAAAuc c    u
GCGU        AA  C       a gcag 

Annotation confidence Not enough data

Genome context

GL349928.1: 621458-621518 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from api-mir-3029

Mature api-miR-3029

• Accession: MIMAT0014765
• Description: Acyrthosiphon pisum api-miR-3029 mature miRNA
• Sequence: 40 - AAAGACGUAAAUGUUACCUGCG - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20444247
   Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
   Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
   BMC Genomics (2010) 11:281