Stem-loop api-mir-3035-1

Accession

MI0013979

Description

Acyrthosiphon pisum api-mir-3035-1 precursor miRNA

Sequence

198 reads, 15.0 reads per million, 4 experiments

auuaagacgaugaccagauaaccgucuaaagcagguuuggucccaugUUACUGGUCAUCGUCUUAACUU
.((((((((((((((((.((((.(.(((((.....))))).)....))))))))))))))))))))...

Structure

--a                a    ---c u     g 
   uuaagacgaugaccag uaac    g cuaaa c
   |||||||||||||||| ||||    | ||||| a
   AAUUCUGCUACUGGUC AUUg    c gguuu g
UUC                -    uacc u     g 

Annotation confidence Not enough data

Genome context

GL350967.1: 60829-60897 [+]

Mature api-miR-3035-3p

• Accession: MIMAT0014771
• Description: Acyrthosiphon pisum api-miR-3035-3p mature miRNA
• Sequence: 48 - UUACUGGUCAUCGUCUUAACUU - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20444247
   Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
   Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
   BMC Genomics (2010) 11:281