Stem-loop api-mir-3041

Accession

MI0013992

Description

Acyrthosiphon pisum api-mir-3041 precursor miRNA

Sequence

ucuuguucaucaaaguuuuaggucguacacgucuauaggaacacUUAAAGCUUUGAUGACGGGAUA
((((((.((((((((((((((((.((.(.(.......)).))))))))))))))))))))))))..

Structure

--      u                c  a a gu 
  ucuugu caucaaaguuuuaggu gu c c  c
  |||||| |||||||||||||||| || | |  u
  AGGGCA GUAGUUUCGAAAUUca ca g g  a
AU      -                -  a - au 

Annotation confidence Not enough data

Genome context

GL349928.1: 621192-621257 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from api-mir-3041

Mature api-miR-3041

• Accession: MIMAT0014779
• Description: Acyrthosiphon pisum api-miR-3041 mature miRNA
• Sequence: 45 - UUAAAGCUUUGAUGACGGGAUA - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20444247
   Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
   Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
   BMC Genomics (2010) 11:281