Stem-loop api-mir-3051-2

Accession

MI0014011

Description

Acyrthosiphon pisum api-mir-3051-2 precursor miRNA

Sequence

11634 reads, 311.0 reads per million, 5 experiments

AAGGAACGUUAAAAACCAUUGUguauauguuugaauccuuaacuuuuacaacgacAAUGGUGUUUUUCGUUUCUAUA
.(((((((..(((.(((((((((((...(((.........)))...)))....)))))))).)))..)))))))...

Structure

--A       UU   A        ----   uau   uga 
   AGGAACG  AAA ACCAUUGU    gua   guu   a
   |||||||  ||| ||||||||    |||   |||   u
   UCUUUGC  UUU UGGUAAca    cau   caa   c
AUA       UU   G        gcaa   uuu   uuc 

Annotation confidence High

Genome context

GL350503.1: 32349-32425 [+]

Mature api-miR-3051-5p

• Accession: MIMAT0014792
• Description: Acyrthosiphon pisum api-miR-3051-5p mature miRNA
• Sequence: 1 - AAGGAACGUUAAAAACCAUUGU - 22
• Evidence: experimental ; Illumina [1]

Mature api-miR-3051-3p

• Accession: MIMAT0057318
• Description: Acyrthosiphon pisum api-miR-3051-3p mature miRNA
• Sequence: 56 - AAUGGUGUUUUUCGUUUCUAUA - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20444247
   Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
   Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
   BMC Genomics (2010) 11:281