Stem-loop api-mir-3045b

Accession

MI0014016

Description

Acyrthosiphon pisum api-mir-3045b precursor miRNA

Sequence

cagaauaaaagcagaccagauuuauguagcaaauccaguuuugaccguggccGCCUGGUGUGCUCUUAUUCUGAA
((((((((.((((.(((((..(((((...((((......))))..)))))....))))).)))).))))))))..

Structure

--        a    g     --au     uag    uc 
  cagaauaa agca accag    uuaug   caaa  c
  |||||||| |||| |||||    |||||   ||||   
  GUCUUAUU UCGU UGGUC    ggugc   guuu  a
AA        C    G     CGcc     -ca    ug 

Annotation confidence Not enough data

Genome context

GL349906.1: 210741-210815 [-]

Mature api-miR-3045b

• Accession: MIMAT0014796
• Description: Acyrthosiphon pisum api-miR-3045b mature miRNA
• Sequence: 53 - GCCUGGUGUGCUCUUAUUCUGAA - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20444247
   Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
   Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
   BMC Genomics (2010) 11:281