miRBase entry: mmu-mir-3065

Stem-loop mmu-mir-3065

Accession

MI0014027

Symbol

MGI: Mir3065

Description

Mus musculus mmu-mir-3065 precursor miRNA

Literature search

2 open access papers mention mmu-mir-3065
(3 sentences)

Sequence

75283 reads, 4 reads per million, 77 experiments

gcagcugcccucuUCAACAAAAUCACUGAUGCUGGagucacugugcacccacUCAGCACCAGGAUAUUGUUGGGGaggacggccugu
(((((((.((((((((((((.(((.(((.(((((.(((............)))))))).)))))).)))))))))))).))).))))

Structure

    -   c            A   A   A     G   cacug 
gcag cug ccucuUCAACAA AUC CUG UGCUG agu     u
|||| ||| |||||||||||| ||| ||| ||||| |||      
uguc ggc ggaGGGGUUGUU UAG GAC ACGAC Uca     g
    c   a            A   -   C     -   cccac

Annotation confidence Not enough data

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Genome context

chr11: 120014767-120014853 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mmu-mir-3065

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mmu-miR-3065-5p

Accession	MIMAT0014836
Description	Mus musculus mmu-miR-3065-5p mature miRNA
Sequence	14 - UCAACAAAAUCACUGAUGCUGG - 35
Evidence	experimental Illumina [1]
Database links
Predicted targets

Mature mmu-miR-3065-3p

Accession	MIMAT0014837
Description	Mus musculus mmu-miR-3065-3p mature miRNA
Sequence	53 - UCAGCACCAGGAUAUUGUUGGGG - 75
Evidence	experimental Illumina [1]

References

PubMed ID: 20413612
Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
"Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
"Genes Dev (2010) 24:992-1009