miRBase entry: mmu-mir-3072

Stem-loop mmu-mir-3072

Accession

MI0014035

Symbol

MGI: Mir3072

Description

Mus musculus mmu-mir-3072 precursor miRNA mir-3072

Gene
family?

RF03527; mir-3072

Literature search

4 open access papers mention mmu-mir-3072
(18 sentences)

Sequence

1443 reads, 46 reads per million, 54 experiments

gggcuguugagugcgAGGGACCCCGAGGGAGGGCAGGcugccccaggcccUGCCCCCUCCAGGAAGCCUUCUugcuccagccc
((((((..(((((.(((((...((..(((.(((((((..(((...)))))))))).)))..))...))))).)))))))))))

Structure

      uu     c     ACC  GA   A       cu   c 
gggcug  gagug gAGGG   CC  GGG GGGCAGG  gcc  
||||||  ||||| |||||   ||  ||| |||||||  ||| c
cccgac  cucgu CUUCC   GG  CUC CCCGUcc  cgg  
      --     U     GAA  AC   C       --   a

Annotation confidence High

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Genome context

chr12: 109747878-109747960 [+]

Clustered miRNAs

8 other miRNAs are < 10 kb from mmu-mir-3072

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mmu-miR-3072-5p

Accession	MIMAT0014852
Description	Mus musculus mmu-miR-3072-5p mature miRNA
Sequence	16 - AGGGACCCCGAGGGAGGGCAGG - 37
Evidence	experimental Illumina [1-2]
Database links
Predicted targets

Mature mmu-miR-3072-3p

Accession	MIMAT0014853
Description	Mus musculus mmu-miR-3072-3p mature miRNA
Sequence	51 - UGCCCCCUCCAGGAAGCCUUCU - 72
Evidence	experimental Illumina [1-2]
Database links
Predicted targets

References

PubMed ID: 20215419
MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
"Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
"Mol Hum Reprod (2010) 16:463-471

PubMed ID: 20413612
Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
"Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
"Genes Dev (2010) 24:992-1009