Stem-loop mmu-mir-3078

Accession

MI0014041

Symbol

MGI: Mir3078

Description

Mus musculus mmu-mir-3078 precursor miRNA

Literature search

1 open access papers mention mmu-mir-3078
(4 sentences)

Sequence

140 reads, 13 reads per million, 16 experiments

acuggcagacugcccCAAAGCCUAGACUGCAGCUACCUuguauugugcuuggggUUGCUGGGGUAGUCUUUAGGggaagcuguuugu
((.(((((.((.((((((((.(((..((((((((.((..(((...)))..)))))))).))..))).)))).)))).))))))).))

Structure

  u     a  g    -    C   GA  -      A  Uu   u 
ac ggcag cu cccC AAAG CUA  CU GCAGCU CC  gua  
|| ||||| || |||| |||| |||  || |||||| ||  ||| u
ug uuguc ga ggGG UUUC GAU  GG CGUUgg gg  cgu  
  u     -  a    A    U   GG  U      -  uu   g 

Annotation confidence Not enough data

Genome context

chr14: 64591185-64591271 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mmu-mir-3078

Mature mmu-miR-3078-5p

• Accession: MIMAT0014864
• Description: Mus musculus mmu-miR-3078-5p mature miRNA
• Sequence: 16 - CAAAGCCUAGACUGCAGCUACCU - 38
• Evidence: experimental ; Illumina [1]

Mature mmu-miR-3078-3p

• Accession: MIMAT0014865
• Description: Mus musculus mmu-miR-3078-3p mature miRNA
• Sequence: 55 - UUGCUGGGGUAGUCUUUAGG - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009