miRBase entry: mmu-mir-3085

Stem-loop mmu-mir-3085


Accession
MI0014048
Symbol
MGI: Mir3085
Description
Mus musculus mmu-mir-3085 precursor miRNA mir-3085
Gene
family?
RF03288; mir-3085

Literature search
2 open access papers mention mmu-mir-3085
(11 sentences)

Sequence

232 reads, 17 reads per million, 32 experiments
gucccaacucugggaAGGUGCCAUUCCGAGGGCCAAGAGUcugaauaugagucacUCUGGCUGCUAUGGCCCCCUCccagggcuugggc
..(((((((((((((.((.(((((......(((((.((((((.......))..)))))))))...))))).)).)))))))).))))).

Structure
gu     -        A  U     UCCGAG     A    --  ga 
  cccaa cucuggga GG GCCAU      GGCCA GAGU  cu  a
  ||||| |||||||| || |||||      ||||| ||||  ||  u
  ggguu gggaccCU CC CGGUA      UCGGU CUca  ga  a
-c     c        C  C     ---UCG     -    cu  gu 


Annotation confidence High
Do you think this miRNA is real?

Genome context
chr19: 42280082-42280170 [-]

Database links

Mature mmu-miR-3085-5p

Accession MIMAT0014878
Description Mus musculus mmu-miR-3085-5p mature miRNA
Sequence 16 - AGGUGCCAUUCCGAGGGCCAAGAGU - 40
Evidence experimental
Illumina [1]
Database links
Predicted targets

Mature mmu-miR-3085-3p

Accession MIMAT0014879
Description Mus musculus mmu-miR-3085-3p mature miRNA
Sequence 56 - UCUGGCUGCUAUGGCCCCCUC - 76
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 20413612
    Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
    "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
    "Genes Dev (2010) 24:992-1009