Stem-loop mmu-mir-3085

Accession

MI0014048

Symbol

MGI: Mir3085

Description

Mus musculus mmu-mir-3085 precursor miRNA mir-3085

Gene
family

RF03288; mir-3085

Literature search

2 open access papers mention mmu-mir-3085
(11 sentences)

Sequence

232 reads, 4 reads per million, 32 experiments

gucccaacucugggaAGGUGCCAUUCCGAGGGCCAAGAGUcugaauaugagucacUCUGGCUGCUAUGGCCCCCUCccagggcuugggc
..(((((((((((((.((.(((((......(((((.((((((.......))..)))))))))...))))).)).)))))))).))))).

Structure

gu     -        A  U     UCCGAG     A    --  ga 
  cccaa cucuggga GG GCCAU      GGCCA GAGU  cu  a
  ||||| |||||||| || |||||      ||||| ||||  ||  u
  ggguu gggaccCU CC CGGUA      UCGGU CUca  ga  a
-c     c        C  C     ---UCG     -    cu  gu 

Annotation confidence High

Genome context

chr19: 42280082-42280170 [-]

Mature mmu-miR-3085-5p

• Accession: MIMAT0014878
• Description: Mus musculus mmu-miR-3085-5p mature miRNA
• Sequence: 16 - AGGUGCCAUUCCGAGGGCCAAGAGU - 40
• Evidence: experimental ; Illumina [1]

Mature mmu-miR-3085-3p

• Accession: MIMAT0014879
• Description: Mus musculus mmu-miR-3085-3p mature miRNA
• Sequence: 56 - UCUGGCUGCUAUGGCCCCCUC - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009