miRBase entry: mmu-mir-669d-2

Stem-loop mmu-mir-669d-2

Accession

MI0014051

Symbol

MGI: Mir669d-2

Description

Mus musculus mmu-mir-669d-2 precursor miRNA

Literature search

9 open access papers mention mmu-mir-669d-2
(12 sentences)

Sequence

2437 reads, 23 reads per million, 90 experiments

gugcauguguguauACUUGUGUGUGCAUGUAUAUGUgucuauaugaauauacAUAUACAUACACACCCAUAUACacacgcaugcac
((((((((((((.((..((.(((((.((((((((((((..........)))))))))))).))))).))..)).))))))))))))

Structure

            a  CU  U     C            cuau 
gugcaugugugu uA  UG GUGUG AUGUAUAUGUgu    a
|||||||||||| ||  || ||||| ||||||||||||     
cacguacgcaca AU  AC CACAC UACAUAUAcaua    u
            C  AU  C     A            uaag

Annotation confidence High

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Genome context

chr2: 10471644-10471729 [+]

Clustered miRNAs

25 other miRNAs are < 10 kb from mmu-mir-669d-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mmu-miR-669d-5p

Accession	MIMAT0005833
Description	Mus musculus mmu-miR-669d-5p mature miRNA
Sequence	15 - ACUUGUGUGUGCAUGUAUAUGU - 36
Evidence	experimental Illumina [1]
Database links
Predicted targets

Mature mmu-miR-669d-2-3p

Accession	MIMAT0014884
Description	Mus musculus mmu-miR-669d-2-3p mature miRNA
Sequence	53 - AUAUACAUACACACCCAUAUAC - 74
Evidence	experimental Illumina [1]
Database links
Predicted targets

References

PubMed ID: 20413612
Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
"Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
"Genes Dev (2010) 24:992-1009