miRBase entry: mmu-mir-669a-6

Stem-loop mmu-mir-669a-6

Accession

MI0014058

Symbol

MGI: Mir669a-6

Description

Mus musculus mmu-mir-669a-6 precursor miRNA

Literature search

15 open access papers mention mmu-mir-669a-6
(22 sentences)

Sequence

23866 reads, 166 reads per million, 100 experiments

ugugcauguguguauAGUUGUGUGUGCAUGUUCAUGUCUauauuugaauauACAUAACAUACACACACACGUAUaaacgcaagcaca
(((((.(((((.((((..((((((((.(((((.((((.(((......))).))))))))).))))))))..)))).))))).)))))

Structure

     a     g    GU        C     C    C   au 
ugugc ugugu uauA  UGUGUGUG AUGUU AUGU Uau  u
||||| ||||| ||||  |||||||| ||||| |||| |||   
acacg acgca aUAU  ACACACAC UACAA UACA aua  u
     a     a    GC        A     -    u   ag

Annotation confidence Medium

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Genome context

chr2: 10484196-10484282 [+]

Clustered miRNAs

28 other miRNAs are < 10 kb from mmu-mir-669a-6

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mmu-miR-669a-5p

Accession	MIMAT0003477
Description	Mus musculus mmu-miR-669a-5p mature miRNA
Sequence	16 - AGUUGUGUGUGCAUGUUCAUGUCU - 39
Evidence	experimental Illumina [1]
Database links
Predicted targets

Mature mmu-miR-669a-3p

Accession	MIMAT0017243
Description	Mus musculus mmu-miR-669a-3p mature miRNA
Sequence	52 - ACAUAACAUACACACACACGUAU - 74
Evidence	experimental Illumina [1]
Database links
Predicted targets

References

PubMed ID: 20413612
Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
"Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
"Genes Dev (2010) 24:992-1009