Stem-loop mmu-mir-3093

Accession

MI0014086

Symbol

MGI: Mir3093

Description

Mus musculus mmu-mir-3093 precursor miRNA

Literature search

2 open access papers mention mmu-mir-3093
(2 sentences)

Sequence

337 reads, 4 reads per million, 12 experiments

cgagcucggcucugcCGCACCCCGCGGAGCUCACACUcgaccuuccagagaagggUGUGGACACCGUGGGAGGUUGGggaggccucg
((((...(.((((.(.((..(((((((.(.((((((....(((((....))))))))))).).)))))))..)).).)))).)))))

Structure

    cuc g    g C  AC       A C      Ucga     c 
cgag   g cucu c GC  CCCGCGG G UCACAC    ccuuc a
||||   | |||| | ||  ||||||| | ||||||    |||||  
gcuc   c gagg G UG  GGGUGCC C GGUGUg    ggaag g
    --- g    G U  GA       A A      ----     a 

Annotation confidence High

Genome context

chr3: 88215171-88215257 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from mmu-mir-3093

Mature mmu-miR-3093-5p

• Accession: MIMAT0014907
• Description: Mus musculus mmu-miR-3093-5p mature miRNA
• Sequence: 16 - CGCACCCCGCGGAGCUCACACU - 37
• Evidence: experimental ; Illumina [1]

Mature mmu-miR-3093-3p

• Accession: MIMAT0014908
• Description: Mus musculus mmu-miR-3093-3p mature miRNA
• Sequence: 56 - UGUGGACACCGUGGGAGGUUGG - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009