Stem-loop mmu-mir-3109

Accession

MI0014106

Symbol

MGI: Mir3109

Description

Mus musculus mmu-mir-3109 precursor miRNA

Literature search

1 open access papers mention mmu-mir-3109
(1 sentences)

Sequence

345 reads, 2 reads per million, 53 experiments

ugccugcuccuguaAAUGGAUGCGAUGGUUCCCAUGCUguucugaggcagagcUAGGGCCAUCUCAUCCAGAUAcuguggagauggua
((((..((((.(((..((((((.(((((..(((.....((((((...))))))..)))))))).))))))..)))...))))..))))

Structure

    ug    --u   AA      C     UU   AUGCU      a 
ugcc  cucc   gua  UGGAUG GAUGG  CCC     guucug  
||||  ||||   |||  |||||| |||||  |||     |||||| g
augg  gagg   cAU  ACCUAC CUACC  GGG     cgagac  
    ua    ugu   AG      U     --   ---AU      g 

Annotation confidence High

Genome context

chr9: 69456944-69457031 [+]

Mature mmu-miR-3109-5p

• Accession: MIMAT0014949
• Description: Mus musculus mmu-miR-3109-5p mature miRNA
• Sequence: 15 - AAUGGAUGCGAUGGUUCCCAUGCU - 38
• Evidence: experimental ; Illumina [1]

Mature mmu-miR-3109-3p

• Accession: MIMAT0014950
• Description: Mus musculus mmu-miR-3109-3p mature miRNA
• Sequence: 54 - UAGGGCCAUCUCAUCCAGAUA - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009