Dead hairpin entry

Stem-loop bmo-mir-2808d

Accession

MI0014260

Description

Bombyx mori bmo-mir-2808d precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

1 open access papers mention bmo-mir-2808d
(2 sentences)

Sequence

9400 reads, 200.0 reads per million, 34 experiments

ggaguauugcuaacacugguccuagcaaaagcagugcuucgcagaaucuacgaccggauuggaaaugcgacccacugagaagauCCGGCGAGAAGCUCGGUGUGCUgcuuggaauaguucuacguauacuua
.((((((.((((..((((.(((......(((((((((.(((.((..(((.((.(((((((.....................))))))))))))..))))).)))))))))))).))))..)).)))))))).

Structure

g      u  -  ac    g   uagcaa         u   c  aa   a  a       ggaaaugcg 
 gaguau gc ua  acug ucc      aagcagugc ucg ag  ucu cg ccggauu         a
 |||||| || ||  |||| |||      ||||||||| ||| ||  ||| || |||||||         c
 uucaua ug au  ugau agg      uucgUCGUG GGC UC  AGA GC GGCCuag         c
a      -  c  cu    a   ------         U   -  GA   -  -       aagagucac