miRBase entry: bmo-mir-3213

Dead hairpin entry

Stem-loop bmo-mir-3213


Accession
MI0014266
Description
Bombyx mori bmo-mir-3213 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

2869 reads, 55.0 reads per million, 34 experiments
aauuguacUACUUUACAGGGAAUGCUCAGCUUGuuucuaaguaccgaaaucaguaaguugucguaggcagauuUUAUAUCUAGGAAAGCUGAUAUGACCgaguguuuguuagaaaaugcaauc
.((((((((((..(((.((..(((.(((((((..(((((.(((..((((((.......((((...)))))))))).))).)))))))))))))))..))..)))...).)))....)))))).

Structure
a      ----   - -UU   -A  GA   C       Gu     a   cc      aguaagu    g 
 auugua    cUA C   UAC  GG  AUG UCAGCUU  uucua gua  gaaauc       uguc  
 ||||||    ||| |   |||  ||  ||| |||||||  ||||| |||  ||||||       |||| u
 uaacgu    gau g   gug  CC  UAU AGUCGAA  AGGAU UAU  UUuuag       acgg  
c      aaaa   u uuu   ag  AG   -       --     C   -A      -------    a