Stem-loop bmo-mir-3219

Accession

MI0014272

Description

Bombyx mori bmo-mir-3219 precursor miRNA

Sequence

70 reads, 13 reads per million, 3 experiments

cgacgauccugaucaggucaccgGUGAGACUAAUAUAUCCAUGGUGUuauuuuuuuuuaaugaucaauuauuucuuucauuggucuacaccaugcauuuuuaaucucaggguucucugaagaauaucaucu
.((.(((..(..(((((..(((..(((((.(((......((((((((..............(((((((.(......).))))))).)))))))).....))).))))).)))..)))))..)..))).)).

Structure

c  c   cc ga     uc   gG     C   UAUAUC        uauuuuuuuuuaau       u uu 
 ga gau  u  ucagg  acc  UGAGA UAA      CAUGGUGU              gaucaau a  u
 || |||  |  |||||  |||  ||||| |||      ||||||||              ||||||| |   
 cu cua  a  agucu  ugg  acucu auu      guaccaca              cugguua u  c
u  a   ua ga     cu   -g     a   -uuuac        -------------u       c uu 

Annotation confidence Not enough data

Genome context

NW_004582010.1: 5219180-5219310 [+]

Mature bmo-miR-3219

• Accession: MIMAT0015399
• Description: Bombyx mori bmo-miR-3219 mature miRNA
• Sequence: 24 - GUGAGACUAAUAUAUCCAUGGUGU - 47
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415